プロフィール詳細

プロジェクトを作成

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Dr. Anamika G.に依頼

Germany

Bioinformatician with 10 years of experience in NGS ,single cell MultiOmics, Deep learning

プロフィール概要

I am a dedicated Bioinformatics Scientist with nearly a decade of experience unraveling the complexities of next-generation sequencing and multi-omics data. My expertise spans single-cell multi-omics, whole genome/exome analysis, bulk RNA sequencing and DNA methylation, with a strong focus on developing pipelines for large-scale data integration and annotation. My journey includes impactful contributions to biomarker discovery for cell-based therapies, cancer genomics, and neurodegenerative disease research. With a robust foundation in Python, R, and machine learning, I thrive at the intersection of biology and technology, crafting innovative solutions for complex challenges. Whether it's integrating multi-omics datasets or leveraging deep learning for biological insights, I bring passion and precision to my work.

専門分野

• ☆ Molecular Biology
• ☆ Omics
• ☆ Comparative Genomics
• ☆ Genomics
• ☆ Next Generation Sequencing (NGS)
• ☆ DNA Sequencing
• ☆ Data Analysis
• ☆ Deep Learning
• ☆ Bioinformatics
• ☆ R
• ☆ Drug Development
• ☆ Pharmacogenomics

サービス

• Research
• Consulting
• Data & AI

Research Scientific and Technical Research

Consulting Healthcare Consulting, Scientific and Technical Consulting

Data & AI Statistical Analysis, Algorithm Design-ML, Data Processing

職務経験

Staff Scientist, Computational Biology

Max Delbrück Center for Molecular Medicine

1月 2025 - 11月 2025

Bioinformatics Scientist

BIH Center for Regenerative therapies & Charité

5月 2021 - 10月 2024

Postdoctoral Resaercher

Berlin Institute of Health at Charité - Universitätsmedizin Berlin

5月 2018 - 5月 2019

Doctoral student

Hertie Institute for Clinical Brain Research

3月 2015 - 2月 2018

Bioinformatician

Universitätsklinikum Düsseldorf

11月 2012 - 11月 2014

学歴

Doctorate

Eberhard Karls Universität Tübingen

3月 2015 - 2月 2018

Masters of Science

University of Bonn

10月 2009 - 5月 2012

Bachelors of Technology

Dr. D. Y. Patil Biotechnology & Bioinformatics Institute

7月 2004 - 6月 2008

認定資格

• Foundations of Project Management

  Google

  6月 2024 - 現在

• Deep Neural Networks with PyTorch

  IBM

  3月 2024 - 現在

出版物

JOURNAL ARTICLE

Krieger TG, Le Blanc S, Jabs J, Ten FW, Ishaque N, Jechow K, Debnath O, Leonhardt CS, Giri A, Eils R, et al. (2021). Single-cell analysis of patient-derived PDAC organoids reveals cell state heterogeneity and a conserved developmental hierarchy . Nature communications.

Giri A, Mok KY, Jansen I, Sharma M, Tesson C, Mangone G, Lesage S, Bras JM, Shulman JM, Sheerin UM, et al. (2016). Lack of evidence for a role of genetic variation in TMEM230 in the risk for Parkinson's disease in the Caucasian population . Neurobiology of aging.

Giri A, Guven G, Hanagasi H, Hauser AK, Erginul-Unaltuna N, Bilgic B, Gurvit H, Heutink P, Gasser T, Lohmann E, et al. (2016). PLA2G6 Mutations Related to Distinct Phenotypes: A New Case with Early-onset Parkinsonism . Tremor and other hyperkinetic movements (New York, N.Y.).

Hanagasi HA, Giri A, Kartal E, Guven G, Bilgiç B, Hauser AK, Emre M, Heutink P, Basak N, Gasser T, et al. (2016). A novel homozygous DJ1 mutation causes parkinsonism and ALS in a Turkish family . Parkinsonism & related disorders.

Daschkey S, Röttgers S, Giri A, Bradtke J, Teigler-Schlegel A, Meister G, Borkhardt A, Landgraf P (2013). MicroRNAs distinguish cytogenetic subgroups in pediatric AML and contribute to complex regulatory networks in AML-relevant pathways . PloS one.