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プロフィール詳細
Andras H.に依頼
Hungary
Technical Writer and Grant Consultant with 20+ years experience in biomedical research, software & business development
プロフィール概要
専門分野
サービス
Writing
Medical Writing,
Technical Writing,
Copywriting,
Creative Writing,
General Proofreading & Editing,
Translation
Research
Market Research,
Scientific and Technical Research
Consulting
Business Strategy Consulting,
Go-to-Market Strategy Consulting,
Scientific and Technical Consulting
Data & AI
Predictive Modeling,
Statistical Analysis,
Algorithm Design-Non ML,
Data Visualization,
Big Data Analytics,
Data Processing
職務経験
Consultant/Owner
UpGrants
4月 2022 - 現在
Freelance Researcher
Institute for Globally Distributed Open Research and Education
5月 2019 - 現在 ![]()
Research Associate
Université du Luxembourg Luxembourg Centre for Systems Biomedicine
5月 2016 - 4月 2019 ![]()
Research Fellow
INESC-ID
7月 2009 - 4月 2016 ![]()
学歴
PhD in Electric and Computer Engineering (DEEC)
University of Lisbon
4月 2011 - 1月 2016 ![]()
Masters in Biomedical Engineering
Semmelweis University
2月 2004 - 2月 2008 ![]()
Masters in Computer Science
Budapest University of Technology and Economics
9月 1999 - 2月 2005 ![]()
認定資格
出版物
JOURNAL ARTICLE
András Hartmann, Satoshi Okawa, Gaia Zaffaroni, Antonio del Sol (2022). Author Correction: SeesawPred: a web application for predicting cell-fate determinants in cell differentiation . Scientific Reports.
Mukli, P., Nagy, Z., Racz, F.S., Portoro, I., Hartmann, A., Stylianou, O., Debreczeni, R., Bereczki, D., Eke, A.(2021). Two-Tiered Response of Cardiorespiratory-Cerebrovascular Network to Orthostatic Challenge . Frontiers in Physiology. 12.
Mukli, P., Nagy, Z., Racz, F.S., Portoro, I., Hartmann, A., Stylianou, O., Debreczeni, R., Bereczki, D., Eke, A.(2021). Corrigendum: Two-Tiered Response of Cardiorespiratory-Cerebrovascular Network to Orthostatic Challenge (Frontiers in Physiology, (2021), 12, (622569), 10.3389/fphys.2021.622569) . Frontiers in Physiology. 12.
Ravichandran, S., Hartmann, A., del Sol, A.(2020). SigHotSpotter: Scrna-seq-based computational tool to control cell subpopulation phenotypes for cellular rejuvenation strategies . Bioinformatics. 36. (6). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1963-1965.
Choobdar, S., Ahsen, M.E., Crawford, J., Tomasoni, M., Fang, T., Lamparter, D., Lin, J., Hescott, B., Hu, X., Mercer, J., et al.(2019). Assessment of network module identification across complex diseases . Nature Methods. 16. (9). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 843-852.
Andras Hartmann and Satoshi Okawa and Gaia Zaffaroni and Antonio del Sol(2018). SeesawPred: A Web Application for Predicting Cell-fate Determinants in Cell Differentiation . Scientific Reports. 8. (1). Springer Nature
András Hartmann, Satoshi Okawa, Gaia Zaffaroni, Antonio del Sol (2018). SeesawPred: A Web Application for Predicting Cell-fate Determinants in Cell Differentiation . Scientific Reports.
Dudnik, A., Almeida, A.F., Andrade, R., Avila, B., Bañados, P., Barbay, D., Bassard, J.-E., Benkoulouche, M., Bott, M., Braga, A., et al.(2018). BacHBerry: BACterial Hosts for production of Bioactive phenolics from bERRY fruits . Phytochemistry Reviews. 17. (2). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 291-326.
Hartmann, A., Okawa, S., Zaffaroni, G., del Sol, A.(2018). SeesawPred: A Web Application for Predicting Cell-fate Determinants in Cell Differentiation . Scientific Reports. 8. (1).
Sascha Jung, Andras Hartmann, Antonio del Sol(2017). RefBool: a reference-based algorithm for discretizing gene expression data . Bioinformatics. 33. (13). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1953--1962. Oxford University Press ({OUP})
Hartmann, A., Vila-Santa, A., Kallscheuer, N., Vogt, M., Julien-Laferrière, A., Sagot, M.-F., Marienhagen, J., Vinga, S.(2017). OptPipe - a pipeline for optimizing metabolic engineering targets . BMC Systems Biology. 11. (1).
Andras Hartmann and Ana Rute Neves and Joao M. Lemos and Susana Vinga(2016). Identification and automatic segmentation of multiphasic cell growth using a linear hybrid model . Mathematical Biosciences. 279. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 83--89. Elsevier {BV}
Hartmann, A., Neves, A.R., Lemos, J.M., Vinga, S.(2016). Identification and automatic segmentation of multiphasic cell growth using a linear hybrid model . Mathematical Biosciences. 279. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 83-89.
Costa, R.S., Hartmann, A., Vinga, S.(2016). Kinetic modeling of cell metabolism for microbial production . Journal of Biotechnology. 219. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 126-141.
Hartmann, A., Lemos, J.M., Vinga, S.(2015). Modeling multiple experiments using regularized optimization: A case study on bacterial glucose utilization dynamics . Computers in Biology and Medicine. 63. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 301-309.
Hartmann, A., Lemos, J.M., Costa, R.S., Xavier, J., Vinga, S.(2015). Identification of switched ARX models via convex optimization and expectation maximization . Journal of Process Control. 28. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 9-16.
András Hartmann, João M. Lemos, Susana Vinga(2014). Modeling multiple experiments using regularized optimization: A case study on bacterial glucose utilization dynamics . Computers in Biology and Medicine. Elsevier {BV}
Costa, R.S., Hartmann, A., Gaspar, P., Neves, A.R., Vinga, S.(2014). An extended dynamic model of Lactococcus lactis metabolism for mannitol and 2,3-butanediol production . Molecular BioSystems. 10. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 628-639.
Hartmann, A., Lemos, J.M., Costa, R.S., Vinga, S.(2014). Identifying IIR filter coefficients using particle swarm optimization with application to reconstruction of missing cardiovascular signals . Engineering Applications of Artificial Intelligence. 34. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 193-198.
Hartmann, A., Mukli, P., Nagy, Z., Kocsis, L., Hermán, P., Eke, A.(2013). Real-time fractal signal processing in the time domain . Physica A: Statistical Mechanics and its Applications. 392. (1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 89-102.
BOOK CHAPTER
Hartmann, A., Ravichandran, S., del Sol, A.(2019). Modeling cellular differentiation and reprogramming with gene regulatory networks . Methods in Molecular Biology. 1975. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 37-51.
OTHER
Choobdar, S., Ahsen, M.E., Crawford, J., Tomasoni, M., Lamparter, D., Lin, J., Hescott, B., Hu, X., Mercer, J., Natoli, T., et al.(2018). Open Community Challenge Reveals Molecular Network Modules with Key Roles in Diseases . SSRN.
Andras Hartmann; (2015). balloonsim v1.0 . Zenodo
Rafael S. Costa, Son Nguyen, Andras Hartmann, Susana Vinga(2014). Exploring the Cellular Objective in Flux Balance Constraint-Based Models . Computational Methods in Systems Biology. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 211--224. Springer Science $\mathplus$ Business Media
BOOK
Costa, R.S. and Nguyen, S. and Hartmann, A. and Vinga, S.(2014). Exploring the cellular objective in flux balance constraint-based models . Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 8859. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 211-224.
Costa, R.S., Nguyen, S., Hartmann, A., Vinga, S.(2014). Exploring the cellular objective in flux balance constraint-based models . Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 8859. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 211-224.
CONFERENCE PAPER
Andras Hartmann, Susana Vinga, Joao M. Lemos(2013). Hybrid identification of time-varying parameter with particle filtering and expectation maximization . 21st Mediterranean Conference on Control and Automation. Institute of Electrical {\&} Electronics Engineers ({IEEE})
Hartmann, A., Vinga, S., Lemos, J.M.(2013). Hybrid identification of time-varying parameter with particle filtering and expectation maximization . 2013 21st Mediterranean Conference on Control and Automation, MED 2013 - Conference Proceedings. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 884-889.
Hartmann, Andras, Kinnaert, Michel(2012). Online Bayesian Time-Varying Parameter Estimation of HIV-1 Time-Series . 16th IFAC Symposium on System Identification. Elsevier {BV}
Hartmann, A. and Vinga, S. and Lemos, J.M.(2012). Identification of HIV-1 dynamics: Estimating the noise model, constant and time-varying parameters of long-term clinical data . BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 286-289.
Hartmann, A., Vinga, S., Lemos, J.M.(2012). Identification of HIV-1 dynamics: Estimating the noise model, constant and time-varying parameters of long-term clinical data . BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 286-289.
Hartmann, A., Vinga, S., Lemos, J.M.(2012). Online Bayesian time-varying parameter estimation of HIV-1 time-series . IFAC Proceedings Volumes (IFAC-PapersOnline). 16. (PART 1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1294-1299.
Andras Hartmann; Susana Vinga; Joao M Lemos; (2012). Identification of HIV-1 Dynamics - Estimating the Noise Model, Constant and Time-varying Parameters of Long-term Clinical Data . Unpublished
Hartmann, A., Vinga, S., Lemos, J.M.(2011). Unified modeling of several perturbation experiments in systems biology: A case study on the glucose uptake of lactococcus lactis . BIOINFORMATICS 2011 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 309-312.
Hartmann, A.(2010). Reconstruction of missing cardiovascular signals using adaptive filtering . Computing in Cardiology. 37. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 321-324.
Hartmann, A.(2010). Reconstruction of missing cardiovascular signals using adaptive filtering . Computing in Cardiology. 37. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 321-324.
András Hartmann; (2010). Reconstruction of missing cardiovascular signals using adaptive filtering . Unpublished