プロフィール詳細

プロジェクトを作成

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Ashraf E.に依頼

Egypt

Senior Bioinformatician in Children cancer hospital 57357

プロフィール概要

I have more than three years’ experience in omics data analysis, software development and python/R programing, this includes genomics, proteomics, metabolomics, metagenomics and multi-omics. I am quite aware of different bioinformatics tools and pipelines for manipulating large-scale sequencing data. I am working currently on several projects concerning whole genome, expression and methylation data differential expression among various types of brain tumor patients for the discovery of new biomarkers for the diseases. I co-authored three publications for NGS and proteomics data analysis with other three under publication. I also have previous projects in microarrays and NGS genomic data where I had developed, in co-operation with two colleagues, a software of big data analysis using Apache Spark software and java for a next generation sequencing genome data. I created another application as well using R shiny app package for proper statistical analysis and display of microarray gene expression data. Moreover, I gained a satisfactory profeciency in biostatistics, machine learning models and their applications. Recently also, I developed my proteomics/metabolomics data full analysis software including most of the available pipeline approaches for proteomics/metabolomics data analysis integrating data preprocessing, quality assessment, normalty check, statistical testing, classification/regression models, visualization methods and functional enrichment analysis.

専門分野

• ☆ Chemoinformatics
• ☆ Biostatistics
• ☆ Molecular Biology
• ☆ Biomarkers
• ☆ Microarrays
• ☆ Omics
• ☆ DNA Sequencing
• ☆ Genome Sequencing
• ☆ Exome Sequencing
• ☆ RNA Sequencing
• ☆ Data Analysis
• ☆ Statistics
• ☆ Bioinformatics
• ☆ German
• ☆ Python
• ☆ Matlab
• ☆ SQL
• ☆ Excel
• ☆ LaTex
• ☆ R
• ☆ Scikit-learn
• ☆ Hadoop
• ☆ Markup Languages
• ☆ Pharmacy
• ☆ Pharmacy Education
• ☆ Drug Discovery
• ☆ Structure-Activity Relationship (SAR) Studies
• ☆ Research Methodology
• ☆ Literature Search

サービス

• Research
• Data & AI

Research Systematic Literature Review

Data & AI Statistical Analysis, Data Visualization, Big Data Analytics, Data Mining, Data Processing, Data Insights

職務経験

Senior Research Associate

Children Cancer Hospital Egypt 57357

12月 2021 - 現在

Graduate Research Assistant / Research Assistant

Uniklinikum Bonn

12月 2020 - 6月 2021

Co-Researcher/Research Assistant

Pharmaceutical institute Bonn university

12月 2019 - 3月 2020

Pharmacist

International medical company, Doha, Qatar

9月 2016 - 1月 2018

Teaching Assistant

Faculty of Pharmacy Sixth of October university, Cairo, Egypt

1月 2016 - 6月 2016

Field Trainer

Hygint pharmaceuticals

1月 2012 - 10月 2015

学歴

Masters of Science

Rheinische Friedrich-Wilhelms Universität Bonn - Germany

10月 2018 - 6月 2021

Bachelors

Cairo University

9月 2005 - 5月 2010

認定資格

• IELTS

  Idp

  9月 2018 - 9月 2020