プロフィール詳細

プロジェクトを作成

★★★★★

☆☆☆☆☆

★★★★★

☆☆☆☆☆

Dr. Davide Maria V.に依頼

Australia

Bioinformatician | Expert in omics | PhD Melbourne University

プロフィール概要

I am currently a post-doctoral researcher based at WEHI, Melbourne (Australia). I am a bioinformatician with extensive experience in the analysis, visualisation and interpretation of multi-omics data both at bulk and single-cell level. I am a daily user of R, Bash and Python on HPC systems and I have also extensive experience in workflow managers (eg Snakemake) and Singularity. My academic background is on human functional genomics, evolutionary biology and immunology.

専門分野

• ☆ Computational Biology
• ☆ Evolutionary Biology
• ☆ Molecular Biology
• ☆ Genetics
• ☆ Omics
• ☆ Transcriptomics
• ☆ Comparative Genomics
• ☆ Genomics
• ☆ Chromatin
• ☆ Epigenetics
• ☆ ATAC-Seq
• ☆ Gene Expression Analysis
• ☆ RNA Sequencing
• ☆ ChIP-Seq
• ☆ Heat Transfer & Calorimetry
• ☆ Data Analysis
• ☆ Data Processing
• ☆ Data Exploration
• ☆ Cluster Analysis
• ☆ Data Visualization
• ☆ Big Data Analytics
• ☆ Data Mining
• ☆ Data Cleaning
• ☆ Statistics
• ☆ Health Data Analysis
• ☆ Bioinformatics
• ☆ Python
• ☆ LaTex
• ☆ R
• ☆ Clinical Immunology
• ☆ Peer Review
• ☆ Technical & Scientific Writing
• ☆ Manuscript & Journal Article Writing

サービス

• Writing
• Data & AI

Writing Technical Writing, Copywriting, Creative Writing

Data & AI Statistical Analysis, Data Visualization, Big Data Analytics, Data Mining, Data Processing

職務経験

Research Officer

The Walter and Eliza Hall Institute

9月 2022 - 現在

学歴

PhD Human evolution and functional genomics

The University of Melbourne

6月 2018 - 6月 2022

認定資格

• 認定資格の詳細は未入力です。

出版物

JOURNAL ARTICLE

Davide Maria Vespasiani, Daniel James Hodson, Michelle Linterman, Hamish William King, Alex J Whale, Jonathan Houseley, Twm Joseff Mitchell, Louise Sarah Matheson, Martin Turner, Sarah Bell, et al. (2025). RNA-binding proteins control the G2–M checkpoint of the germinal center B cell . Science Immunology.

Fiamma Salerno, Alex J. Whale, Louise S. Matheson, Davide Vespasiani, William S. Foster, Twm J. Mitchell, Michael Screen, Melanie Stammers, Sarah E. Bell, Daniel J. Hodson, et al. (2025). RNA binding proteins control the G 2 -M checkpoint of the germinal center B cell . Science Immunology.

Davide M. Vespasiani, Anna Di Rienzo, Guy S. Jacobs, Laura E. Cook, Nicolas Brucato, Matthew Leavesley, Christopher Kinipi, François-Xavier Ricaut, Murray P. Cox, Irene Gallego Romero (2022). Denisovan introgression has shaped the immune system of present-day Papuans . PLOS Genetics.

(2019). Host-pathogen coevolution increases genetic variation in susceptibility to infection . eLife.

PREPRINT

Laura E Cook, Charles Y Feigin, John D Hills, Davide M Vespasiani, Andrew J Pask, Irene Gallego Romero (2025). Gene regulatory dynamics during craniofacial development in a carnivorous marsupial .

Laura E Cook, Charles Y Feigin, John D Hills, Davide M Vespasiani, Andrew J Pask, Irene Gallego Romero (2025). Gene regulatory dynamics during craniofacial development in a carnivorous marsupial .

Navya Shukla, Laura E. Cook, Davide M. Vespasiani, Andrew J. Pask, Irene Gallego Romero (2025). Dissecting functional regulatory convergence over 160 million years of therian evolution .

Maddy Comerford, Davide M Vespasiani, Navya Shukla, Laura E Cook, Danat Yermakovich, Michael Dannemann, Matthew Leavesley, Christopher Kinipi, François-Xavier Ricaut, Nicolas Brucato, et al. (2025). Mapping the gene regulatory landscape of archaic hominin introgression in modern Papuans .

Laura E Cook, Charles Y Feigin, John Hills, Davide M Vespasiani, Andrew J Pask, Irene Gallego Romero (2025). Gene regulatory dynamics during craniofacial development in a carnivorous marsupial .

Laura E. Cook, Charles Y. Feigin, John Hills, Davide M. Vespasiani, Andrew J. Pask, Irene Gallego Romero (2023). Gene regulatory dynamics during craniofacial development in a carnivorous marsupial .

Davide M. Vespasiani, Guy S. Jacobs, Laura E. Cook, Nicolas Brucato, Matthew Leavesley, Christopher Kinipi, Francois-Xavier Ricaut, Murray P. Cox, Irene Gallego Romero (2020). Denisovan introgression has shaped the immune system of present-day Papuans .