プロフィール詳細

プロジェクトを作成

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Dr. Fatemeh Z.に依頼

Germany

Bioinformatician, Omics data analysor | Expert in R, python, shell and HPC

プロフィール概要

I am a PhD-level molecular biologist and bioinformatician with about 10 years of experience bridging wet-lab experimentation and computational biology. Having worked in both academic research and clinical settings, my core expertise is in human genetics, DNA/RNA sequencing, and multi-omics data analysis, including both bulk and single-cell approaches. On the computational side, I am highly proficient in R programming, Linux shell scripting, and using SLURM for high-performance computing (HPC) and server cluster management. I also specialize in building automated, reproducible data pipelines using Nextflow and Snakemake.

専門分野

• ☆ Molecular Biology
• ☆ Genetics
• ☆ Omics
• ☆ Next Generation Sequencing (NGS)
• ☆ ATAC-Seq
• ☆ ChIP-Seq
• ☆ Data Analysis
• ☆ Bioinformatics
• ☆ Biographical Research & Writing
• ☆ Python
• ☆ R

サービス

• Writing
• Research
• Data & AI

Writing Clinical Trial Documentation, Medical Writing, Non-Medical Regulatory Writing, Technical Writing, Creative Writing, Newswriting

Research Scientific and Technical Research

Data & AI Statistical Analysis, Data Visualization, Big Data Analytics, Data Processing

職務経験

Research Scientists

testblu diagnostics, Berlin, Germany

1月 2025 - 1月 2026

Scientific researchers

Researcher

2月 2021 - 4月 2025

PhD student

Freie Universität Berlin

1月 2021 - 4月 2025

PhD student

Max Planck Institute for Molecular Genetics

2021 - 2025

学歴

PhD (biology)

Freie Universität Berlin

2021 - 2025

認定資格

• PhD

  fu

  4月 2025 - 現在

出版物

JOURNAL ARTICLE

Fatemeh Zebardast, Michael Peter Sascha Riethmüller, Katja Nowick (2025). Integrative gene co-expression network analysis reveals protein-coding and LncRNA genes associated with Alzheimer’s disease pathology . Scientific Reports.

Fatemeh Zebardast, Deisy Morselli Gysi, Tiago de Miranda Fragoso, Wesley Bertoli, Volker Busskamp, Eivind Almaas, Katja Nowick (2020). Whole transcriptomic network analysis using Co-expression Differential Network Analysis (CoDiNA) . PLOS ONE.

Fatemeh Zebardast, Mohammadreza Zamani, Mostafa Motallebi, Zahra Moghaddassi-Jahromi (2015). Antifungal activity of recombinant rice LTP2 on some phytopathogenic fungi . Progress in Biological Sciences.

PREPRINT

Fatemeh Zebardast, Michael Peter Sascha Riethmüller, Katja Nowick (2025). Integrative Gene Co-expression Network Analysis Reveals Protein-Coding and lncRNA Genes Associated with Alzheimer’s Disease Pathology .