プロフィール詳細

プロジェクトを作成

★★★★★

☆☆☆☆☆

★★★★★

☆☆☆☆☆

Dr. Giorgio G.に依頼

Italy

Freelance Bioinformatician, Biostatistician, Data Scientist | Expert in BigData, Microbiota Research, NGS

プロフィール概要

Associate Professor of Agricultural Microbiology at the University of Milan with over 10 years of experience in microbiology, microbiome research, food and wine fermentation, bioinformatics, and biostatistics. My research focuses on the characterization of microbial communities through culture-dependent and culture-independent approaches, including 16S rRNA gene sequencing, shotgun metagenomics, metabolomics, and culturomics. I have extensive experience in the analysis of microbiome datasets, microbial ecology, fermented foods, wine microbiology, and host–microbiome interactions. I have authored more than 50 peer-reviewed scientific publications and have participated in several national and international research projects involving microbiome science, food systems, nutrition, and sustainable fermentation processes. I currently lead research activities investigating microbial consortia in wine fermentation, fermented foods, and gut microbiome modulation. My technical expertise includes: Microbiome study design and experimental planning 16S and shotgun metagenomic data analysis Bioinformatics workflows and statistical analysis in R Microbial ecology and fermentation science Wine microbiology and enology Food microbiology and food safety Metabolomics data interpretation Scientific writing, grant preparation, and manuscript review I am available for consulting projects involving microbiome research, microbial data analysis, fermentation processes, experimental design, scientific writing, and research strategy development for academic institutions, biotechnology companies, food industries, and startups.

専門分野

• ★ Microbiology
• ★ Biostatistics
• ★ Bioinformatics
• ☆ Molecular Biology
• ☆ Genetics
• ☆ Omics
• ☆ Next Generation Sequencing (NGS)
• ☆ Data Analysis
• ☆ Data Processing
• ☆ Machine Learning
• ☆ Ecology
• ☆ Applied Ecology
• ☆ Microbial Ecology
• ☆ R

サービス

• Writing
• Research
• Data & AI

Writing Technical Writing

Research Meta-Research, Fact Checking, Gray Literature Search, Systematic Literature Review, Secondary Data Collection

Data & AI Predictive Modeling, Statistical Analysis, Data Visualization, Data Insights

職務経験

RTDb

Università degli Studi di Milano

8月 2023 - 現在

PostDoc fellowship: Big Data analyses for biomarker detection in mammalian cancer

IRCCS Istituto Nazionale dei Tumori (Milano)

10月 2018 - 現在

PostDoc fellowship: Maple project by JPI; Bioinformatics, Biostatistics and NGS data analyses

University of Milano

10月 2017 - 10月 2018

Internship Trascriptomics analysis

INRA Functional genomics group (Paris)

1月 2014 - 8月 2014

Internship in Genetic therapy

Généthon, Evry (Paris).

2月 2013 - 9月 2013

Internship in Microarray analyses

IRCCS Burlo Garofolo hospital.

3月 2009 - 2月 2010

学歴

Master Java development

Istituto formativo europeo

2月 2018 - 現在

Ph.D. in Food Systems: Characterization of the intestinal microbial ecosystem through bioinformatic and statistical analyses of the microbiomics data

University of Milano

10月 2014 - 10月 2017

Master 2 degree: Genome and Organisms Sciences, Systems & Synthetic biology. ECTF:B

University of Evry-Val d'Essonne, Paris (FR).

9月 2013 - 8月 2014

Five years degree in Biology/Functional genomics. Vote:100/100 cum laude

University of Trieste (Italy)

9月 2007 - 12月 2013

認定資格

• 認定資格の詳細は未入力です。

出版物

JOURNAL ARTICLE

Giorgio Gargari, Giacomo Mantegazza, Nicola Mangieri, Elnaz Vojoudi Yazdi, Pasquale Russo, Diego Mora (2025). Unveiling the Potential of Lentilactobacillus hilgardii in Malolactic Fermentation: Comparative Genomics and Fermentation Dynamics . Microbial Biotechnology.

Giorgio Gargari, Robin Duncan, Giacomo Mantegazza, Elena Pierallini, Rosario Russo, Simone Guglielmetti (2025). Heyndrickxia coagulans LMG S-24828 Is a Safe Probiotic Strain Capable of Germinating in the Human Gut . Probiotics and Antimicrobial Proteins.

Giorgio Gargari, Tomas Meroño, Gregorio Peron, Cristian Del Bo’, Mirko Marino, Antonio Cherubini, Cristina Andres-Lacueva, Paul Antony Kroon, Patrizia Riso, Simone Guglielmetti (2025). Effect of a polyphenol-rich dietary pattern on subjects aged ≥ 60 years with higher levels of inflammatory markers: insights into microbiome and metabolome . Microbiome Research Reports.

Marinella Marzano, Roshan Singh Thakur, Silvio Bicciato, Matteo Raneri, Simone Guglielmetti, Fabio Grassi, Davide Mangani, Benedetta De Ponte Conti, Graziano Pesole, Giorgio Gargari, et al. (2025). Secretory IgA amplification during immune checkpoint blockade enhances the control of tumor growth by enterotropic T cells . Science Advances.

Giorgio Gargari, Benedetta De Ponte Conti, Rebecca Marino, Tanja Rezzonico-Jost, Mattia Forcato, Davide Mangani, Elisabetta Notario, Elena Carelli, Andrea Rinaldi, Andrea Raimondi, et al. (2025). Secretory IgA amplification during immune checkpoint blockade enhances the control of tumor growth by enterotropic T cells . Science Advances.

Giorgio Gargari, Lucrezia Laterza, Cesare Cremon, Gaetano Coppola, Carlo Romano Settanni, Rossella Maresca, Martina Strazzeri, Eleonora Durini, Valentina Petito, Franco Scaldaferri, et al. (2025). Multistrain Probiotics Plus Vitamin D Improve Gut Barrier Function and Gut Microbiota Composition in Irritable Bowel Syndrome Without Constipation: Results from a Double-Blind, Randomized, Placebo-Controlled Trial . Nutrients.

Giorgio Gargari, Lucrezia Laterza, Cesare Cremon, Gaetano Coppola, Carlo Romano Settanni, Rossella Maresca, Martina Strazzeri, Eleonora Durini, Valentina Petito, Franco Scaldaferri, et al. (2025). Multistrain Probiotics Plus Vitamin D Improve Gut Barrier Function and Gut Microbiota Composition in Irritable Bowel Syndrome Without Constipation: Results from a Double-Blind, Randomized, Placebo-Controlled Trial . Nutrients.

Giorgio Gargari, Giacomo Mantegazza, Valentina Taverniti, Claudio Gardana, Alice Valenza, Federico Rossignoli, Maria Raffaella Barbaro, Giovanni Marasco, Cesare Cremon, Giovanni Barbara, et al. (2023). Fecal short-chain fatty acids in non-constipated irritable bowel syndrome: a potential clinically relevant stratification factor based on catabotyping analysis . Gut Microbes.

Giorgio Gargari, Michela Carola Speciani, Roberto Penagini, Massimiliano Mutignani, Monica Ferraroni, Arianna Natale, Michail Katsoulis, Marcello Cintolo, Pierfrancesco Leone, Aldo Airoldi, et al. (2023). Garlic consumption in relation to colorectal cancer risk and to alterations of blood bacterial DNA . European Journal of Nutrition.

Giorgio Gargari, Massimiliano Mutignani, Roberto Penagini, Simone Guglielmetti, Marcello Cintolo, Aldo Airoldi, Pierfrancesco Leone, Pietro Carnevali, Clorinda Ciafardini, Giulio Petrocelli, et al. (2021). Blood Bacterial DNA Load and Profiling Differ in Colorectal Cancer Patients Compared to Tumor-Free Controls . Cancers.

Giorgio Gargari, Massimiliano Mutignani, Roberto Penagini, Simone Guglielmetti, Marcello Cintolo, Aldo Airoldi, Pierfrancesco Leone, Pietro Carnevali, Clorinda Ciafardini, Giulio Petrocelli, et al. (2021). Blood Bacterial DNA Load and Profiling Differ in Colorectal Cancer Patients Compared to Tumor-Free Controls . Cancers.

Giorgio Gargari, Gregorio Peron, Tomás Meroño, Antonio Miñarro, Esteban Vegas Lozano, Pol Castellano Escuder, Raúl González-Domínguez, Nicole Hidalgo-Liberona, Cristian Del Bo’, Stefano Bernardi, et al.(2021). Crosstalk among intestinal barrier, gut microbiota and serum metabolome after a polyphenol-rich diet in older subjects with “leaky gut”: The MaPLE trial . Clinical Nutrition. 40. (10). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 5288--5297. Elsevier {BV}

Giorgio Gargari, Cristian Del Bo', Stefano Bernardi, Antonio Cherubini, Marisa Porrini, Nicole Hidalgo-Liberona, Raúl González-Domínguez, Raul Zamora-Ros, Gregorio Peron, Mirko Marino, et al.(2021). A polyphenol-rich dietary pattern improves intestinal permeability, evaluated as serum zonulin levels, in older subjects: The MaPLE randomised controlled trial . Clinical Nutrition. 40. (5). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 3006--3018. Elsevier {BV}

Guglielmetti, S., Bernardi, S., Del Bo', C., Cherubini, A., Porrini, M., Gargari, G., Hidalgo-Liberona, N., Gonzalez-Dominguez, R., Peron, G., Zamora-Ros, R., et al.(2020). Effect of a polyphenol-rich dietary pattern on intestinal permeability and gut and blood microbiomics in older subjects: Study protocol of the MaPLE randomised controlled trial . BMC Geriatrics. 20. (1).

Koirala, R., Gargari, G., Arioli, S., Taverniti, V., Fiore, W., Grossi, E., Anelli, G.M., Cetin, I., Guglielmetti, S.(2020). Effect of oral consumption of capsules containing Lactobacillus paracasei LPC-S01 on the vaginal microbiota of healthy adult women: A randomized, placebo-controlled, double-blind crossover study . FEMS Microbiology Ecology. 96. (6).

Martini, D., Bernardi, S., Del Bo’, C., Liberona, N.H., Zamora-Ros, R., Tucci, M., Cherubini, A., Porrini, M., Gargari, G., González-Domínguez, R., et al.(2020). Estimated intakes of nutrients and polyphenols in participants completing the maple randomised controlled trial and its relevance for the future development of dietary guidelines for the older subjects . Nutrients. 12. (8). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1-17.

Gargari, G., Taverniti, V., Koirala, R., Gardana, C., Guglielmetti, S.(2020). Impact of a multistrain probiotic formulation with high bifidobacterial content on the fecal bacterial community and short-chain fatty acid levels of healthy adults . Microorganisms. 8. (4).

Dalla Via, A., Gargari, G., Taverniti, V., Rondini, G., Velardi, I., Gambaro, V., Visconti, G.L., De Vitis, V., Gardana, C., Ragg, E., et al.(2020). Urinary TMAO levels are associated with the taxonomic composition of the gut microbiota and with the choline TMA-lyase gene (cutC) harbored by enterobacteriaceae . Nutrients. 12. (1).

Bernardi S, Del Bo' C, Marino M, Gargari G, Cherubini A, Andrés-Lacueva C, Hidalgo-Liberona N, Peron G, González-Dominguez R, Kroon P, et al.(2019). Polyphenols and Intestinal Permeability: Rationale and Future Perspectives . Journal of agricultural and food chemistry.

Perruzza L, Strati F, Gargari G, D'Erchia AM, Fosso B, Pesole G, Guglielmetti S, Grassi F(2019). Enrichment of intestinal Lactobacillus by enhanced secretory IgA coating alters glucose homeostasis in P2rx7-/- mice . Scientific reports.

Cattaneo C, Riso P, Laureati M, Gargari G, Pagliarini E(2019). Exploring Associations between Interindividual Differences in Taste Perception, Oral Microbiota Composition, and Reported Food Intake . Nutrients.

Taverniti V, Marengo M, Fuglsang E, Skovsted HM, Arioli S, Mantegazza G, Gargari G, Iametti S, Bonomi F, Guglielmetti S, et al.(2019). Surface Layer of Lactobacillus helveticus MIMLh5 Promotes Endocytosis by Dendritic Cells . Applied and environmental microbiology.

Cattaneo C, Gargari G, Koirala R, Laureati M, Riso P, Guglielmetti S, Pagliarini E(2019). New insights into the relationship between taste perception and oral microbiota composition . Scientific reports.

Pepè Sciarria T, Arioli S, Gargari G, Mora D, Adani F(2019). Monitoring microbial communities' dynamics during the start-up of microbial fuel cells by high-throughput screening techniques . Biotechnology Reports.

Taverniti V, Koirala R, Dalla Via A, Gargari G, Leonardis E, Arioli S, Guglielmetti S(2019). Effect of Cell Concentration on the Persistence in the Human Intestine of Four Probiotic Strains Administered through a Multispecies Formulation . Nutrients.

Taverniti, V., Koirala, R., Dalla Via, A., Gargari, G., Leonardis, E., Arioli, S., Guglielmetti, S.(2019). Effect of cell concentration on the persistence in the human intestine of four probiotic strains administered through a multispecies formulation . Nutrients. 11. (2).

Pepè Sciarria, T., Arioli, S., Gargari, G., Mora, D., Adani, F.(2019). Monitoring microbial communities’ dynamics during the start-up of microbial fuel cells by high-throughput screening techniques . Biotechnology Reports. 21.

Cattaneo, C., Gargari, G., Koirala, R., Laureati, M., Riso, P., Guglielmetti, S., Pagliarini, E.(2019). New insights into the relationship between taste perception and oral microbiota composition . Scientific Reports. 9. (1).

Taverniti, V., Marengo, M., Fuglsang, E., Skovsted, H.M., Arioli, S., Mantegazza, G., Gargari, G., Iametti, S., Bonomi, F., Guglielmetti, S., et al.(2019). Surface layer of Lactobacillus helveticus MIMLh5 promotes endocytosis by dendritic cells . Applied and Environmental Microbiology. 85. (9).

Cattaneo, C., Riso, P., Laureati, M., Gargari, G., Pagliarini, E.(2019). Exploring associations between interindividual differences in taste perception, oral microbiota composition, and reported food intake . Nutrients. 11. (5).

Perruzza, L., Strati, F., Gargari, G., D’Erchia, A.M., Fosso, B., Pesole, G., Guglielmetti, S., Grassi, F.(2019). Enrichment of intestinal Lactobacillus by enhanced secretory IgA coating alters glucose homeostasis in P2rx7 ^−/− mice . Scientific Reports. 9. (1).

Bernardi, S., Del Bo', C., Marino, M., Gargari, G., Cherubini, A., Andrés-Lacueva, C., Hidalgo-Liberona, N., Peron, G., González-Dominguez, R., Kroon, P., et al.(2019). Polyphenols and Intestinal Permeability: Rationale and Future Perspectives . Journal of Agricultural and Food Chemistry.

Gargari G, Taverniti V, Gardana C, Cremon C, Canducci F, Pagano I, Barbaro MR, Bellacosa L, Castellazzi AM, Valsecchi C, et al.(2018). Fecal Clostridiales distribution and short-chain fatty acids reflect bowel habits in irritable bowel syndrome . Environmental microbiology.

Colombo S, Arioli S, Gargari G, Neri E, Della Scala G, Mora D(2018). Characterization of airborne viromes in cheese production plants . Journal of applied microbiology.

Gargari G, Deon V, Taverniti V, Gardana C, Denina M, Riso P, Guardamagna O, Guglielmetti S(2018). Evidence of dysbiosis in the intestinal microbial ecosystem of children and adolescents with primary hyperlipidemia and the potential role of regular hazelnut intake . FEMS microbiology ecology.

Gargari, G., Deon, V., Taverniti, V., Gardana, C., Denina, M., Riso, P., Guardamagna, O., Guglielmetti, S.(2018). Evidence of dysbiosis in the intestinal microbial ecosystem of children and adolescents with primary hyperlipidemia and the potential role of regular hazelnut intake . FEMS microbiology ecology. 94. (5).

Cremon, C., Guglielmetti, S., Gargari, G., Taverniti, V., Castellazzi, A.M., Valsecchi, C., Tagliacarne, C., Fiore, W., Bellini, M., Bertani, L., et al.(2018). Effect of Lactobacillus paracasei CNCM I-1572 on symptoms, gut microbiota, short chain fatty acids, and immune activation in patients with irritable bowel syndrome: A pilot randomized clinical trial . United European Gastroenterology Journal. 6. (4). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 604-613.

Colombo, S., Arioli, S., Gargari, G., Neri, E., Della Scala, G., Mora, D.(2018). Characterization of airborne viromes in cheese production plants . Journal of Applied Microbiology. 125. (5). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1444-1454.

Gargari, G., Taverniti, V., Gardana, C., Cremon, C., Canducci, F., Pagano, I., Barbaro, M.R., Bellacosa, L., Castellazzi, A.M., Valsecchi, C., et al.(2018). Fecal Clostridiales distribution and short-chain fatty acids reflect bowel habits in irritable bowel syndrome . Environmental Microbiology. 20. (9). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 3201-3213.

Cremon C, Guglielmetti S, Gargari G, Taverniti V, Castellazzi AM, Valsecchi C, Tagliacarne C, Fiore W, Bellini M, Bertani L, et al.(2017). Effect of Lactobacillus paracasei CNCM I-1572 on symptoms, gut microbiota, short chain fatty acids, and immune activation in patients with irritable bowel syndrome: A pilot randomized clinical trial . United European Gastroenterology Journal.

Colombo S, Arioli S, Neri E, Della Scala G, Gargari G, Mora D(2017). Viromes As Genetic Reservoir for the Microbial Communities in Aquatic Environments: A Focus on Antimicrobial-Resistance Genes . Frontiers in microbiology.

Perruzza L, Gargari G, Proietti M, Fosso B, D'Erchia AM, Faliti CE, Rezzonico-Jost T, Scribano D, Mauri L, Colombo D, et al.(2017). T Follicular Helper Cells Promote a Beneficial Gut Ecosystem for Host Metabolic Homeostasis by Sensing Microbiota-Derived Extracellular ATP . Cell reports.

Deon, V., Del Bò, C., Guaraldi, F., Gargari, G., Bosusco, A., Simonetti, P., Riso, P., Guardamagna, O.(2017). Serum lipid profile and fatty acid composition of erythrocyte phospholipids in children and adolescents with primary hyperlipidemia . International Journal of Food Sciences and Nutrition. 68. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 339-348.

Colombo, S., Arioli, S., Neri, E., Della Scala, G., Gargari, G., Mora, D.(2017). Viromes as genetic reservoir for the microbial communities in aquatic environments: A focus on antimicrobial-resistance genes . Frontiers in Microbiology. 8. (JUN).

Perruzza, L., Gargari, G., Proietti, M., Fosso, B., D'Erchia, A.M., Faliti, C.E., Rezzonico-Jost, T., Scribano, D., Mauri, L., Colombo, D., et al.(2017). T Follicular Helper Cells Promote a Beneficial Gut Ecosystem for Host Metabolic Homeostasis by Sensing Microbiota-Derived Extracellular ATP . Cell Reports. 18. (11). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 2566-2575.

Deon V, Del Bò C, Guaraldi F, Gargari G, Bosusco A, Simonetti P, Riso P, Guardamagna O(2016). Serum lipid profile and fatty acid composition of erythrocyte phospholipids in children and adolescents with primary hyperlipidemia . International journal of food sciences and nutrition.

Gargari G, Taverniti V, Balzaretti S, Ferrario C, Gardana C, Simonetti P, Guglielmetti S(2016). Consumption of a Bifidobacterium bifidum Strain for 4 Weeks Modulates Dominant Intestinal Bacterial Taxa and Fecal Butyrate in Healthy Adults . Applied and Environmental Microbiology.

Montagna M, Mereghetti V, Gargari G, Guglielmetti S, Faoro F, Lozzia G, Locatelli D, Limonta L(2016). Evidence of a bacterial core in the stored products pest Plodia interpunctella: the influence of different diets . Environmental microbiology.

Montagna, M., Mereghetti, V., Gargari, G., Guglielmetti, S., Faoro, F., Lozzia, G., Locatelli, D., Limonta, L.(2016). Evidence of a bacterial core in the stored products pest Plodia interpunctella: the influence of different diets . Environmental Microbiology. 18. (12). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 4961-4973.

Gargari, G., Taverniti, V., Balzaretti, S., Ferrario, C., Gardana, C., Simonetti, P., Guglielmetti, S.(2016). Consumption of a bifidobacterium bifidum strain for 4 weeks modulates dominant intestinal bacterial taxa and fecal butyrate in healthy adults . Applied and Environmental Microbiology. 82. (19). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 5850-5859.