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プロフィール詳細

プロジェクトを作成

★★★★★

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★★★★★

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Dr. John B.に依頼

United States

プロフィール概要

I am interested in various aspects of genetics, genomics and evolution. My skills include high density genetic mapping, including muli-million loci SNP based genetic maps, genome assembly and study of ancient polyploidy events. I have extensive experience with large data sets of many different types relating to genetic and genomic data from plants.

専門分野

• ☆ Plant Breeding & Genetics
• ☆ Genetics
• ☆ Genomics
• ☆ Data Analysis

サービス

• Consulting
• Data & AI
• Product Development

職務経験

Postdoc, Research Scientist

University of Georgia

2月 1999 - 10月 2016

学歴

PhD

University of California, Davis

7月 1993 - 6月 1998

M.S

University of California, Davis

7月 1989 - 6月 1993

B.S.

California Institute of Technology

8月 1985 - 6月 1989

認定資格

• 認定資格の詳細は未入力です。

出版物

JOURNAL ARTICLE

(2016). Genetic Mapping of Millions of SNPs in Safflower (Carthamus tinctorius L.) via Whole-Genome Resequencing . G3-Genes Genomes Genetics. 6. (7). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 2203-2211.

(2015). A Unified Single Nucleotide Polymorphism Map of Sunflower (Helianthus annuus L.) Derived from Current Genomic Resources . Crop Science. 55. (4). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1696-1702.

(2015). Association mapping in sunflower (Helianthus annuus L.) reveals independent control of apical vs. basal branching . Bmc Plant Biology. 15.

Li, Jingping, Tang, Haibao, Bowers, John E., Ming, Ray, Paterson, Andrew H., Paterson, AH(2014). Insights into the Common Ancestor of Eudicots . Genomes of Herbaceous Land Plants. 69. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 137-174.

(2014). Genetic analysis of safflower domestication . Bmc Plant Biology. 14.

(2012). Development of a 10,000 Locus Genetic Map of the Sunflower Genome Based on Multiple Crosses . G3-Genes Genomes Genetics. 2. (7). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 721-729.

(2012). Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres . Nature. 492. (7429). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 423-+.

(2012). SNP Discovery and Development of a High-Density Genotyping Array for Sunflower . Plos One. 7. (1).

(2012). Development of an Ultra-Dense Genetic Map of the Sunflower Genome Based on Single-Feature Polymorphisms . Plos One. 7. (12).

(2012). A genome triplication associated with early diversification of the core eudicots . Genome Biology. 13. (1).

(2012). Comparative mapping in intraspecific populations uncovers a high degree of macrosynteny between A- and B-genome diploid species of peanut . Bmc Genomics. 13.

(2012). A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut . Bmc Genomics. 13.

(2011). A physical map of Brassica oleracea shows complexity of chromosomal changes following recursive paleopolyploidizations . Bmc Genomics. 12.

(2010). Angiosperm genome comparisons reveal early polyploidy in the monocot lineage . Proceedings of the National Academy of Sciences of the United States of America. 107. (1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 472-477.

(2009). Comparative genomic analysis of C4 photosynthetic pathway evolution in grasses . Genome Biology. 10. (6).

(2009). Evolutionary fate of rhizome-specific genes in a non-rhizomatous Sorghum genotype . HEREDITY. 102. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 266-273.

(2009). Comparative Genomics of Grasses Promises a Bountiful Harvest . PLANT PHYSIOLOGY. 149. (1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 125-131.

(2009). The Sorghum bicolor genome and the diversification of grasses . NATURE. 457. (7229). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 551-556.

(2008). Finding and Comparing Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape: CoGe with Rosids . PLANT PHYSIOLOGY. 148. (4). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1772-1781.

(2008). Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps . GENOME RESEARCH. 18. (12). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1944-1954.

(2008). Perspective - Synteny and collinearity in plant genomes . SCIENCE. 320. (5875). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 486-488.

(2007). Extensive concerted evolution of rice paralogs and the road to regaining independence . GENETICS. 177. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1753-1763.

(2007). Physical and genetic structure of the maize genome reflects its complex evolutionary history . PLOS GENETICS. 3. (7). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1254-1263.

(2006). Taking the first steps towards a standard for reporting on phylogenies: Minimum information about a phylogenetic analysis (MIAPA) . OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY. 10. (2). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 231-237.

(2006). Many gene and domain families have convergent fates following independent whole-genome duplication events in Arabidopsis, Oryza, Saccharomyces and Tetraodon . TRENDS IN GENETICS. 22. (11). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 597-602.

(2006). Evolutionary history of the angiosperms and its relevance to Brassica . Proceedings of the Joint Meeting of the Fourteenth Crucifer Genetics Workshop and Fourth Ishs Symposium on Brassicas. (706). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 49-53.

(2006). Buffering of crucial functions by paleologous duplicated genes may contribute cyclicality to angiosperm genome duplication . PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 103. (8). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 2730-2735.

(2005). Comparative genomics of Gossypium and Arabidopsis: Unraveling the consequences of both ancient and recent polyploidy . GENOME RESEARCH. 15. (9). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1198-1210.

(2005). Crop-to-weed introgression has impacted allelic composition of johnsongrass populations with and without recent exposure to cultivated sorghum . MOLECULAR ECOLOGY. 14. (7). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 2143-2154.

(2005). Ancient duplication of cereal genomes . NEW PHYTOLOGIST. 165. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 658-661.

(2005). Diversity and selection in sorghum: simultaneous analyses using simple sequence repeats . THEORETICAL AND APPLIED GENETICS. 111. (1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 23-30.

(2005). Comparative physical mapping links conservation of microsynteny to chromosome structure and recombination in grasses . PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 102. (37). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 13206-13211.

(2004). A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium) . GENETICS. 166. (1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 389-417.

(2004). Comparative genome analysis of monocots and dicots, toward characterization of angiosperm diversity . CURRENT OPINION IN BIOTECHNOLOGY. 15. (2). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 120-125.

(2003). Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events . NATURE. 422. (6930). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 433-438.

(2003). In-depth view of structure, activity, and evolution of rice chromosome 10 . SCIENCE. 300. (5625). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1566-1569.

(2003). A high-density genetic recombination map of sequence-tagged sites for Sorghum, as a framework for comparative structural and evolutionary genomics of tropical grains and grasses . GENETICS. 165. (1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 367-386.

(2002). Characterization of RFLP probe sequences for gene discovery and SSR development in Sorghum bicolor (L.) Moench . THEORETICAL AND APPLIED GENETICS. 105. (6-7). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 912-920.

(2002). Genetic, physical, and informatics resources for maize on the road to an integrated map . PLANT PHYSIOLOGY. 130. (4). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1598-1605.

(2002). Construction of a Saccharum consensus genetic map from two interspecific crosses . CROP SCIENCE. 42. (2). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 570-583.

(2002). Integration of Cot analysis, DNA cloning, and high-throughput sequencing facilitates genome characterization and gene discovery . GENOME RESEARCH. 12. (5). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 795-807.

(2001). Distinguishing Carmenere from similar cultivars by DNA typing . AMERICAN JOURNAL OF ENOLOGY AND VITICULTURE. 52. (4). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 396-399.

(2001). Toward integration of comparative genetic, physical, diversity, and cytomolecular maps for grasses and grains, using the sorghum genome as a foundation . PLANT PHYSIOLOGY. 125. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1325-1341.

(2000). Comparative genomics of plant chromosomes . PLANT CELL. 12. (9). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1523-1539.

(1999). Development and characterization of additional microsatellite DNA markers for grape . AMERICAN JOURNAL OF ENOLOGY AND VITICULTURE. 50. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 243-246.

MEREDITH, CP, MEREDITH, CP, BOWERS, JE, RIAZ, S, et al.(1999). The identity and parentage of the variety known in California as Petite Sirah . AMERICAN JOURNAL OF ENOLOGY AND VITICULTURE. 50. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 236-242.

Bowers, J. E., Meredith, C. P.(1997). The origin of Cabernet Sauvignon . American Journal of Enology and Viticulture. 48. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 375.

(1997). The parentage of a classic wine grape, Cabernet Sauvignon . NATURE GENETICS. 16. (1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 84-87.

(1997). Phenetic relationships among winegrape cultivars based on DNA polymorphism analysis at simple sequence repeat loci . American Journal of Enology and Viticulture. 48. (2). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 266.

BOWERS, JE, DANGL, GS, VIGNANI, R, et al.(1996). Isolation and characterization of new polymorphic simple sequence repeat loci in grape (Vitis vinifera L) . GENOME. 39. (4). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 628-633.

(1995). Microsatellite DNA typing for international cooperation in the identification of grape varieties . American Journal of Enology and Viticulture. 46. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 403-404.

(1993). DNA FINGERPRINT CHARACTERIZATION OF SOME WINE GRAPE CULTIVARS . AMERICAN JOURNAL OF ENOLOGY AND VITICULTURE. 44. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 266-274.

(1992). DNA FINGERPRINTING OF SOME CALIFORNIA WINE GRAPE CULTIVARS . American Journal of Enology and Viticulture. 43. (3). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 300-301.

BOOK

(2008). Genomics of sorghum, a semi-arid cereal and emerging model for tropical grass genomics . Genomics of Tropical Crop Plants. 1. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 469-482.

CONFERENCE PAPER

(2004). A comparative phylogenetic approach for dating whole genome duplication events . Annual Plant and Animal Genome Conference (PAG). 20. (2). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 180-185.

(2004). Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics . International Congress in the Wake of the Double Helix. 101. (26). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 9903-9908.