プロフィール詳細

プロジェクトを作成

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Mohit K.に依頼

Germany

Bioinformatician & AI Engineer | Multi-Omics, NGS Pipelines & Machine Learning (Python/R)

プロフィール概要

I am a bioinformatician and AI engineer who turns complex biological data into clear, reproducible answers. Over roughly two years across three research groups, I have worked on next-generation sequencing analysis, multi-omics integration, and machine learning, building the pipelines and models that take raw data through to interpretable results. My technical core is Python, R, and Bash on Linux and HPC, with reproducible, containerized workflows using Nextflow, Docker, and Git. I analyze RNA-seq, whole-genome, single-cell, and spatial-omics data, and I build and interpret machine learning models (gradient boosting, Random Forest, SHAP) for high-dimensional biological problems. I also work at the applied AI-for-biology frontier, using bio foundation and language models such as ESM-3, transformers, retrieval-augmented generation, and prompt engineering. My current research is in viral ecology and phage genomics, where I study phages, mobile genetic elements, and microbial communities through metagenomics and comparative genomics. Earlier work spans quantitative genetics and genomic prediction. This is supported by a conference poster accepted for 2026 and a manuscript under review. I hold a Master's in Biotechnology with a bioinformatics specialization. I work well independently and across disciplines, and I care about clean code, documentation, and results that clients can trust and reproduce.

専門分野

• ★ Comparative Genomics
• ★ Agronomy & Crop Science
• ★ Bioinformatics
• ☆ Computational Biology
• ☆ Evolutionary Biology
• ☆ Microbiology
• ☆ Microbiology
• ☆ Microbiome Research
• ☆ Phycology/Algae
• ☆ Agricultural Microbiology
• ☆ Biostatistics
• ☆ Mathematical Biology
• ☆ Biochemistry
• ☆ Oxidative Stress & Mitochondrial Function
• ☆ Molecular Biology
• ☆ Genetics
• ☆ Omics
• ☆ Transcriptomics
• ☆ Lipidomics
• ☆ Proteomics
• ☆ Metabolomics
• ☆ Genomics
• ☆ Molecular Evolution
• ☆ Chromatin
• ☆ Epigenetics
• ☆ Next Generation Sequencing (NGS)
• ☆ ATAC-Seq
• ☆ Synthetic Genomics
• ☆ Gene Expression Analysis
• ☆ Genome Sequencing
• ☆ Mutagenesis
• ☆ Exome Sequencing
• ☆ RNA Sequencing
• ☆ Plasmid DNA
• ☆ ChIP-Seq
• ☆ Soil Science
• ☆ Plant Biotechnology
• ☆ Agricultural Economics
• ☆ Data Analysis
• ☆ Machine Learning
• ☆ Statistics
• ☆ Statistical Theory
• ☆ Comparative Analysis
• ☆ Meta-Analysis
• ☆ Regression Analysis
• ☆ Multivariate Analysis
• ☆ Nonlinear Regression
• ☆ Correlation Analysis
• ☆ Statistical Computing
• ☆ Spatial Statistics
• ☆ Medical Statistics
• ☆ Health Data Analysis
• ☆ Gene & Protein Expression Analysis
• ☆ Systems Biology
• ☆ Biomarker Discovery
• ☆ Phylogenetics
• ☆ Population Genetics

サービス

• Research
• Data & AI

Research Market Research, Meta-Research, Gap Analysis, Gray Literature Search

Data & AI Predictive Modeling, Statistical Analysis, Algorithm Design-ML

職務経験

Justus-Liebig-Universität Gießen

- 現在

Bioinformaticians

Alganize GmbH

3月 2026 - 現在

学歴

MSc in Biotechnology

Justus Liebig Universität Gießen - Germany

9月 2021 - 3月 2025

認定資格

• 2026 Virus Bioinformatics and nf-core Hybrid Collaborative Hackathon

  European Virus Bioinformatics Center

  https://drive.google.com/file/d/1ytgVXzcKHc__GXwcfUZY_CM5YlaZN3y0/view

  5月 2026 - 現在