プロフィール詳細

プロジェクトを作成

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Radhika M.に依頼

India

Bioinformatics Scientist | scRNA-seq · Long-read ONT · Clinical Genomics · Pipeline Engineering | Python · R

プロフィール概要

I am a bioinformatician with 2+ years of experience in end-to-end genomic data analysis, pipeline development, and scalable workflow engineering. My work spans single-cell RNA-seq, bulk RNA-seq, whole-genome sequencing, and long-read sequencing (Oxford Nanopore/ONT), with hands-on experience in both clinical and research settings. At Mount Sinai Hospital (Sinai Health, Toronto), I built production-grade RNA-seq pipelines for 130+ thyroid cancer samples, contributed to gnomAD-Canada (Canada's first genome aggregation database), and ran GWAS workflows for large-scale genetic datasets on HPC and cloud (AWS, GCP). At Elucidata, I work on client-facing bioinformatics delivery projects including isoform quantification in single-cell long-read RNA-seq — currently benchmarking ONT-based tools against published ground truth datasets for a pharma client. I'm comfortable working independently, delivering clean reproducible code, and communicating results clearly. Tools I work with daily: Python, R, Bash, Nextflow, Snakemake, Docker, Seurat, Scanpy, DESeq2, STARsolo, and cloud platforms.

専門分野

• ★ Bioinformatics
• ☆ Computational Biology
• ☆ Biostatistics
• ☆ Gene & Protein Expression Analysis
• ☆ Structural Bioinformatics
• ☆ Python
• ☆ Excel
• ☆ LaTex
• ☆ R

サービス

• Writing
• Research
• Data & AI

Writing Medical Writing

Research Scientific and Technical Research, Systematic Literature Review

Data & AI Data Visualization, Big Data Analytics, Data Processing

職務経験

Bioinformatics Scientist II

Elucidata

12月 2025 - 現在

Bioinformatician

Mount Sinai Hospital

6月 2023 - 1月 2026

Research trainee

Centre for Addiction and Mental Health (CAMH)

9月 2022 - 12月 2022

学歴

Master of Health Science (Medical Genomics)

University of Toronto

9月 2021 - 4月 2023

Bachelor of Technology (Genetic Engineering )

SRM Institute of Science and Technology

6月 2016 - 8月 2020

認定資格

• 認定資格の詳細は未入力です。

出版物

JOURNAL ARTICLE

Radhika Mahajan, Erika Frangione, Juan De Los Rios, Selina Casalino, Navneet Aujla, Saranya Arnoldo, Alexandra Binnie, Bjug Borgundvaag, Marc Dagher, Luke Devine, et al. (2026). Clinically significant DNA variation from the GENCOV and HostSeq COVID-19 genome sequencing studies . Journal of Medical Genetics.

Radhika Mahajan, Diane R. Koeller, McKenzie Walker, Busra Unal, Anu Chittenden, Alison Schwartz Levine, Connor P. Hayes, Paul C. Oramasionwu, Monica D. Manam, Ryan M. Buehler, et al. (2025). Advancing the Landscape of Clinical Actionability in Von Hippel–Lindau Syndrome: An Evidence-Based Framework from the INT²GRATE Oncology Consortium . Cancers.

Radhika Mahajan, Seema Panchal, Navneet Aujla, Paul McKay, Selina Casalino, Vanessa Di Gioacchino, George S Charames, Maude Lefebvre, Kelly A Metcalfe, Mohammad Reza Akbari, et al. (2024). Recontact to return new or updated PALB2 genetic results in the clinical laboratory setting . Journal of Medical Genetics.