プロフィール詳細

プロジェクトを作成

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Dr. Swaraj B.に依頼

Sweden

Postdoctoral Researcher at University of Gothenburg

プロフィール概要

Work experience in diverse projects involving plant sciences, marine sciences, developmental biology and cancer genomics. Specializing in the field of computational genomics and big data mining in the biological sciences.

専門分野

• ☆ STEM
• ☆ Biochemistry
• ☆ Molecular Biology
• ☆ Genomics
• ☆ Molecular Evolution
• ☆ Molecular Ecology
• ☆ Big Data Analytics
• ☆ Data Mining
• ☆ Bioinformatics

サービス

• Writing
• Research
• Data & AI

職務経験

Post Doctoral Fellow

University of Gothenburg

12月 2015 - 現在

Post Doctoral Fellow

Stazione Zoologica Anton Dohrn

2月 2014 - 9月 2015

PhD Student

Stazione Zoologica Anton Dohrn

1月 2011 - 12月 2013

System Analyst

National Institute of Plant Genome Research

7月 2009 - 12月 2010

Junior Research Fellow

National Institute of Plant Genome Research

10月 2008 - 7月 2009

Project Assistant

National Institute of Plant Genome Research

7月 2008 - 9月 2008

Project Assistant

Indian Institute of Technology Delhi

2月 2008 - 6月 2008

学歴

PhD (Biology and Evolution of Marine Organisms)

Stazione Zoologica Anton Dohrn

1月 2011 - 12月 2013

認定資格

• 認定資格の詳細は未入力です。

出版物

JOURNAL ARTICLE

(2018). Grazer-induced transcriptomic and metabolomic response of the chain-forming diatom Skeletonema marinoi . The ISME journal.

Basu S, Larsson E(2018). A Catalogue of Putative cis-Regulatory Interactions Between Long Non-coding RNAs and Proximal Coding Genes Based on Correlative Analysis Across Diverse Human Tumors . G3 (Bethesda, Md.).

Ashraf N, Basu S, Narula K, Ghosh S, Tayal R, Gangisetty N, Biswas S, Aggarwal PR, Chakraborty N, Chakraborty S(2018). Integrative network analyses of wilt transcriptome in chickpea reveal genotype dependent regulatory hubs in immunity and susceptibility . Scientific reports.

(2018). Topoisomerase 3α Is Required for Decatenation and Segregation of Human mtDNA . Molecular cell.

(2017). Finding a partner in the ocean: molecular and evolutionary bases of the response to sexual cues in a planktonic diatom . The New phytologist.

(2017). Tissue- and Cell Type-Specific Expression of the Long Noncoding RNA Klhl14-AS in Mouse . International journal of genomics.

(2016). Somatic Mutation Patterns in Hemizygous Genomic Regions Unveil Purifying Selection during Tumor Evolution . PLoS genetics.

(2016). The Tetraodon nigroviridis reference transcriptome: developmental transition, length retention and microsynteny of long non-coding RNAs in a compact vertebrate genome . Scientific reports.

(2015). Annocript: a flexible pipeline for the annotation of transcriptomes able to identify putative long noncoding RNAs . Bioinformatics (Oxford, England).

(2015). Comprehensive transcriptome analysis of Crocus sativus for discovery and expression of genes involved in apocarotenoid biosynthesis . BMC genomics.

Agrawal L, Narula K, Basu S, Shekhar S, Ghosh S, Datta A, Chakraborty N, Chakraborty S(2013). Comparative proteomics reveals a role for seed storage protein AmA1 in cellular growth, development, and nutrient accumulation . Journal of proteome research.

(2013). Highly conserved elements discovered in vertebrates are present in non-syntenic loci of tunicates, act as enhancers and can be transcribed during development . Nucleic acids research.

Basu S, Müller F, Sanges R(2013). Examples of sequence conservation analyses capture a subset of mouse long non-coding RNAs sharing homology with fish conserved genomic elements . BMC bioinformatics.

Ashraf N, Ghai D, Barman P, Basu S, Gangisetty N, Mandal MK, Chakraborty N, Datta A, Chakraborty S(2009). Comparative analyses of genotype dependent expressed sequence tags and stress-responsive transcriptome of chickpea wilt illustrate predicted and unexpected genes and novel regulators of plant immunity . BMC genomics.