プロフィール詳細

プロジェクトを作成

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Dr. Thawfeek V.に依頼

United Kingdom

PhD in mathematical modelling | Computational systems biologist | biocurator | life sciences informatician

プロフィール概要

With a PhD in computational systems biology, I've several years of experience working with mathematical modelling and network analysis of cellular networks. I've worked as a biocurator and trainer for workshops for several years with exposure to data standards and good practices in the field.

専門分野

• ★ Bioinformatics
• ☆ Mathematical Biology
• ☆ Systems Biology

サービス

• Consulting
• Data & AI

Consulting Scientific and Technical Consulting

Data & AI Statistical Analysis, Data Visualization

職務経験

Scientific Database Curator

European Bioinformatics Institute

12月 2016 - 現在

Scientific Database Curator

European Bioinformatics Institute

2月 2016 - 11月 2016

Junior Research Fellow

Indian Institute of Technology Bombay

10月 2009 - 7月 2011

学歴

Doctor of Philosophy (Systems Biology Ireland, School of Medicine and Molecular Science)

University College Dublin

9月 2011 - 12月 2015

Bachelor of Technology (Biotechnology)

PSG College of Technology

6月 2005 - 6月 2009

認定資格

• 認定資格の詳細は未入力です。

出版物

JOURNAL ARTICLE

Thawfeek Mohamed Varusai, Steven Jupe, Cristoffer Sevilla, Lisa Matthews, Marc Gillespie, Lincoln Stein, Guanming Wu, Peter D’Eustachio, Emmanouil Metzakopian, Henning Hermjakob(2020). Using Reactome to build an autophagy mechanism knowledgebase . Autophagy. Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 1--12. Informa {UK} Limited

Malik-Sheriff RS, Glont M, Nguyen TVN, Tiwari K, Roberts MG, Xavier A, Vu MT, Men J, Maire M, Kananathan S, et al.(2019). BioModels-15 years of sharing computational models in life science . Nucleic acids research.

Jassal B, Matthews L, Viteri G, Gong C, Lorente P, Fabregat A, Sidiropoulos K, Cook J, Gillespie M, Haw R, et al.(2019). The reactome pathway knowledgebase . Nucleic acids research.

Viteri G, Matthews L, Varusai T, Gillespie M, Milacic M, Cook J, Weiser J, Shorser S, Sidiropoulos K, Fabregat A, et al.(2019). Reactome and ORCID-fine-grained credit attribution for community curation . Database : the journal of biological databases and curation.

T Varusai(2018). {GPCR} downstream signaling . Reactome - a curated knowledgebase of biological pathways. 67. Reactome

Jupe S, Ray K, Roca CD, Varusai T, Shamovsky V, Stein L, D'Eustachio P, Hermjakob H(2018). Interleukins and their signaling pathways in the Reactome biological pathway database . The Journal of allergy and clinical immunology.

Fabregat A, Jupe S, Matthews L, Sidiropoulos K, Gillespie M, Garapati P, Haw R, Jassal B, Korninger F, May B, et al.(2018). The Reactome Pathway Knowledgebase . Nucleic acids research.

Varusai TM, Nguyen LK(2018). Dynamic modelling of the mTOR signalling network reveals complex emergent behaviours conferred by DEPTOR . Scientific Reports.

Lloret-Villas A, Varusai TM, Juty N, Laibe C, Le NovÈre N, Hermjakob H, Chelliah V, CPT: pharmacometrics & systems pharmacology, 2017, 2017 .

Waltemath D, Karr JR, Bergmann FT, Chelliah V, Hucka M, Krantz M, Liebermeister W, Mendes P, Myers CJ, Pir P, Alaybeyoglu B, Aranganathan NK, Baghalian K, Bittig AT, Burke PE, Cantarelli M, Chew YH, Costa RS, Cursons J, Czauderna T, IEEE transactions on bio-medical engineering, 2016, vol. 63, no. 10, pp. 2007-2014, 2016 .

Varusai TM, Kolch W, Kholodenko BN, Nguyen LK, Molecular bioSystems, 2015, vol. 11, no. 10, pp. 2750-2762, 2015 .

Nguyen LK, Zhao Q, Varusai TM, Kholodenko BN, IET systems biology, 2014, vol. 8, no. 6, pp. 282-292, 2014 .

DATA SET

(2019). STAT5 Activation .

(2019). Stat5 Activation .

(2018). PDE3A,3B hydrolyses cAMP to AMP .

(2018). Microautophagy .

(2018). Chaperone Mediated Autophagy .

(2018). Lipophagy .

(2018). Autophagy .

(2017). Interleukin-37 signaling .

(2017). Interleukin-38 signaling .

(2017). G beta:gamma signalling through CDC42 .

(2017). G beta:gamma signalling through BTK .