level-one heading

プロフィール詳細

プロジェクトを作成

★★★★★

☆☆☆☆☆

★★★★★

☆☆☆☆☆

Dr. Varun b K.に依頼

India

プロフィール概要

My key areas of interest are Computational Biology Evolutionary Systems Biology Synthetic Biology Drug Discovery Programming in MATLAB Signal Transduction Data Mining Networks Molecular Biology Functional Annotation Signalling networks

専門分野

• ☆ Computational Biology
• ☆ Microbiology
• ☆ Biochemistry
• ☆ Structural Biology
• ☆ Cell Signaling Pathways
• ☆ Biotechnology & Bioengineering
• ☆ Algorithm Design
• ☆ Data Mining
• ☆ Bioinformatics
• ☆ Systems Biology
• ☆ Applied Mathematics
• ☆ Matlab
• ☆ Software Development

サービス

• Writing
• Consulting
• Data & AI
• Product Development

職務経験

Lead Scientist

Digi.Bio

7月 2019 - 現在

PDRA Control Engineering and Synthetic Biology

University of Edinburgh

11月 2017 - 4月 2019

Postdoctoral Computational Biologist

Babraham Institute

11月 2016 - 11月 2017

BRIO Intern

GlaxoSmithkline

3月 2010 - 5月 2015

Visiting researcher

University of Copenhagen

1月 2013 - 2月 2013

学歴

PhD in mathematics (mathematics)

University of Exeter

12月 2010 - 11月 2014

MSc, Drug Discovery and Translational Biology (School of Biological Sciences )

University of Edinburgh

9月 2008 - 8月 2009

Bachelor of Engineering in Biotechnology (Biotechnology)

Visvesvaraya Technological University

11月 2004 - 5月 2008

Bachelors, Engineering

Visvesvaraya Technological University

10月 2004 - 5月 2008

認定資格

• 認定資格の詳細は未入力です。

出版物

JOURNAL ARTICLE

Varun B. Kothamachu, Sabrina Zaini, Federico Muffatto(2020). Role of Digital Microfluidics in Enabling Access to Laboratory Automation and Making Biology Programmable . SLAS TECHNOLOGY: Translating Life Sciences Innovation. 25. (5). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 411--426. {SAGE} Publications

Varun Bhaskar Kothamachu, Sabrina Zaini, Federico Muffatto(2020). Role of Digital Microfluidics in Enabling Access to Laboratory Automation and Making Biology Programmable . SLAS technology.

Mihai Glonț, Tung Nguyen V. N., Martin Graesslin, Robert Hälke, Raza Ali, Jochen Schramm, Sarala Wimalaratne, Varun Bhaskar Kothamachu, Nicolas Rodriguez, Maciej J. Swat, et al.(2017). BioModels: expanding horizons to include more modelling approaches and formats . Nucleic acids research.

Varun B Kothamachu, Mihai Glont, Tung V N Nguyen, Martin Graesslin, Robert Hälke, Raza Ali, Jochen Schramm, Sarala M Wimalaratne, Nicolas Rodriguez, Maciej J Swat, et al.(2017). BioModels: expanding horizons to include more modelling approaches and formats . Nucleic Acids Research. 46. (D1). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString D1248--D1253. Oxford University Press ({OUP})

Janna Hastings, Abraham Mains, Marta Artal-Sanz, Sven Bergmann, Bart P. Braeckman, Jacob Bundy, Filipe Cabreiro, Paul D. Dobson, Paul R. Ebert, Jake Hattwell, et al.(2017). WormJam: A consensus C. elegans Metabolic Reconstruction and Metabolomics Community and Workshop Series . Worm.

Janna Hastings, Abraham Mains, Marta Artal-Sanz, Sven Bergmann, Bart P. Braeckman, Jake Bundy, Filipe Cabreiro, Paul Dobson, Paul Ebert, Jake Hattwell, et al.(2017). WormJam: A consensus C. elegans Metabolic Reconstruction and Metabolomics Community and Workshop Series . Worm. 6. (2). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString e1373939. Informa {UK} Limited

Varun Bhaskar Kothamachu, Elisenda Feliu, Luca Cardelli, Orkun S. Soyer(2015). Unlimited multistability and Boolean logic in microbial signalling . Journal of the Royal Society, Interface.

Varun B. Kothamachu, Elisenda Feliu, Luca Cardelli, Orkun S. Soyer(2015). Unlimited multistability and Boolean logic in microbial signalling . Journal of The Royal Society Interface. 12. (108). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 20150234. The Royal Society

Kothamachu, Varun B. and Feliu, Elisenda and Cardelli, Luca and Soyer, Orkun S.(2015). Unlimited multistability and Boolean logic in microbial signalling . Journal of The Royal Society Interface. 12. (108). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString 20150234.

Munia Amin, Varun Bhaskar Kothamachu, Elisenda Feliu, Birgit E. Scharf, Steven Porter, Orkun S. Soyer(2014). Phosphate Sink Containing Two-Component Signaling Systems as Tunable Threshold Devices . PLoS computational biology.

Amin, Munia and Kothamachu, Varun B. and Feliu, Elisenda and Scharf, Birgit E. and Porter, Steven L. and Soyer, Orkun S.(2014). Phosphate Sink Containing Two-Component Signaling Systems as Tunable Threshold Devices . PLoS Comput Biol. 10. (10). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString e1003890.

Varun Bhaskar Kothamachu, Elisenda Feliu, Carsten Wiuf, Luca Cardelli, Orkun Soyer(2013). Phosphorelays provide tunable signal processing capabilities for the cell . PLoS computational biology.

Kothamachu, Varun B. and Feliu, Elisenda and Wiuf, Carsten and Cardelli, Luca and Soyer, Orkun S.(2013). Phosphorelays Provide Tunable Signal Processing Capabilities for the Cell . PLoS Comput Biol. 9. (11). Microsoft.AspNetCore.Mvc.Localization.LocalizedHtmlString e1003322.

PREPRINT

Lucia Bandiera, Varun Bhaskar Kothamachu, Eva Balsa-Canto, Peter S. Swain, Filippo Menolascina(2018). Optimally designed vs intuition-driven inputs: the study case of promoter activity modelling .

OTHER

L. Bandiera, V. Kothamachu, E. Balsa-Canto, P. S. Swain, F. Menolascina(2018). Optimally designed vs intuition-driven inputs: the study case of promoter activity modelling . Cold Spring Harbor Laboratory