プロフィール詳細

プロジェクトを作成

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Victoria A.に依頼

Ghana

Clinical Microbiologist & Bioinformatician | End-to-End Bacterial RNA-Seq, Metagenomics & Data Visualization

プロフィール概要

Bridging the gap between the laboratory bench and computational data analysis, I am a Clinical Microbiologist (MSc) and Computational Biologist specializing in high-throughput bacterial genomics. My unique dual-expertise allows me to understand the biological complexities of microbial systems—specifically bacterial biofilms and antimicrobial resistance (AMR)—while executing rigorous, end-to-end computational pipelines to extract actionable insights. As a published researcher and lead author in microbial biofilm dynamics, I bring deep domain knowledge to every dataset I analyze. I translate raw sequencing files into clean, reproducible workflows and publication-ready biological conclusions. Core Technical Expertise & Deliverables: Bacterial RNA-Seq Pipelines: Complete transcriptomic workflows from raw data to biological insight, including quality control, HISAT2/Salmon alignment, samtools processing, and robust differential gene expression (DGE) profiling using DESeq2. Metagenomics & WGS: Whole Genome Sequencing analysis, functional annotation, and taxonomic profiling of complex microbial communities. Advanced Data Visualization: Custom, high-resolution figures using R (ggplot2), including volcano plots, PCA plots, and hierarchical clustering heatmaps optimized for peer-reviewed journals or stakeholder presentations. Data Reproducibility: Production-grade, fully documented Bash and R scripts to ensure all analyses meet top-tier academic and industrial compliance standards. How I Add Value to Your Project: Whether you are an academic lab preparing a manuscript or a biotech firm accelerating antimicrobial research, you can hand over your raw sequencing data (FASTQ files or count matrices) with total confidence. I deliver fully executed computational pipelines, a comprehensive interpreted results report, and publication-ready visual assets tailored exactly to your milestones.

専門分野

• ★ Microbiology
• ★ RNA Sequencing
• ☆ Computational Biology
• ☆ Molecular Biology
• ☆ Omics
• ☆ Transcriptomics
• ☆ Genomics
• ☆ Next Generation Sequencing (NGS)
• ☆ DNA Sequencing
• ☆ Gene Expression Analysis
• ☆ Python
• ☆ R

サービス

• Writing
• Research
• Consulting
• Data & AI

Writing Medical Writing, Technical Writing, General Proofreading & Editing

Research Gap Analysis, Scientific and Technical Research, Systematic Literature Review

Consulting Healthcare Consulting, Scientific and Technical Consulting

Data & AI Statistical Analysis, Data Visualization, Big Data Analytics, Data Cleaning, Data Processing, Data Insights

職務経験

Lead Bioinformatician & Clinical Microbiologist

Bioinformatics & Genomics Consultant (Independent)

1月 2026 - 現在

学歴

MSc Clinical Microbiology (School of Health and Life Science)

Glasgow Caledonian University

- 現在

認定資格

• Metagenomics applied to surveillance of pathogens and antimicrobial resistance

  Coursera (Technical University of Denmark)

  https://www.coursera.org/account/accomplishments/certificate/VCSWA4LZF5Z5

  1月 2026 - 現在

出版物

JOURNAL ARTICLE

Characterization of a Strain of Staphylococcus Aureus Isolated from the Catheter of a Patient from the Glasgow Infirmary Agbede, V.T. (2021). Characterization of a strain of Staphylococcus aureus retrieved from the catheter of a patient from the Glasgow Infirmary. The International Journal of Science & Technoledge, 9(4). DOI: 10.24940/theijst/2021/v9/i4/ST2104-018 . The International Journal of Science & Technoledge.